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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2945917_2946303_R

Intron Information:

Intron Rank:

139199

Intron Class:

major

Intron Phase:

Intron Coordinates:

2945917 - 2946303

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

CCTTTCCCAGCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.8

39.2

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

83.8

0.76

0.8

76.9

37.3

Minor 5ss

34.7

-1.7

3.2

46.8

42.3

Minor BPS

-0.3

2.1

64.26

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032929

2882569 - 2946725

64157

ENSAPLT00000020081

2882569 - 2946725

64157