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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2945917_2973701_R

Intron Information:

Intron Rank:

139202

Intron Class:

major

Intron Phase:

Intron Coordinates:

2945917 - 2973701

Intron Length:

27785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTGAG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

CCTTTCCCAGCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

74.2

36.3

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

83.8

0.76

0.8

76.9

37.3

Minor 5ss

32.1

-2

3.1

40.2

45.9

Minor BPS

-0.3

2.1

64.26

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027990

2882569 - 2986833

104265