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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2973876_2986745_R

Intron Information:

Intron Rank:

139203

Intron Class:

major

Intron Phase:

Intron Coordinates:

2973876 - 2986745

Intron Length:

12870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TTACCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

TGTCCCTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.3

71.5

41.1

Major BPS

70.1

0.5

70.3

31.9

Major PPT

83.7

0.76

0.8

81.2

30.5

Minor 5ss

43.4

-0.7

2.9

58.9

40.2

Minor BPS

71.8

0.76

1.6

86.57

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027990

2882569 - 2986833

104265