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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3027348_3028198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3027348 - 3028198

Intron Length:

851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGTATGC

5'SS Class:

major

3'SS Sequence:

TTTAATTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTTTTTTAATT

Flanking Amino Acid:

EQAIKGLYSSWITDNILAMA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.1

0.29

1.1

52.4

39.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.7

0.65

0.8

77.5

36.4

Minor 5ss

37.1

-1.5

3.3

47.7

43.2

Minor BPS

74.1

0.84

1.1

81.14

35.2

Associated Gene:

Gene:

PTPDC1

Ensembl Gene ID:

ENSAPLG00000013824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024881

3025830 - 3034002

8173

ENSAPLT00000022672

3025830 - 3034617

8788

ENSAPLT00000019756

3025830 - 3034617

8788

ENSAPLT00000014408

3024348 - 3033834

9487

ENSAPLT00000043920

3025830 - 3033834

8005