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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3032302_3033723_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3032302 - 3033723

Intron Length:

1422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGATATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTACCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTCTTCTAACG

Flanking Amino Acid:

SQDALNLLRKEQCQTILCIL

Intron Amino Acid Position:

707

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

84.2

33.9

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

75.5

0.57

0.9

68.1

38.4

Minor 5ss

39.6

-1.2

3.3

59.2

45.4

Minor BPS

58.8

0.14

1.7

69.07

38.3

Associated Gene:

Gene:

PTPDC1

Ensembl Gene ID:

ENSAPLG00000013824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024881

3025830 - 3034002

8173

ENSAPLT00000019756

3025830 - 3034617

8788