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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3038209_3038765_R

Intron Information:

Intron Rank:

154995

Intron Class:

major

Intron Phase:

Intron Coordinates:

3038209 - 3038765

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCACT

5'SS Class:

major

3'SS Sequence:

TTGTTGTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

TAAATCTCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

68.4

42.4

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

80.6

0.69

0.9

73.5

41.9

Minor 5ss

-1

3.1

59.2

44.9

Minor BPS

57.1

0.3

1.5

71.08

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048311

3037949 - 3040265

2317