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Intron Name: Anas_platyrhynchos_platyrhynchos_13_309233_311206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

309233 - 311206

Intron Length:

1974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATATATA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGTCTTTTTATA

Flanking Amino Acid:

LTSKEIKRQEAIFELTQGEE

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

82.1

30.4

Major BPS

79.2

0.73

75.3

39.4

Major PPT

84.5

0.78

0.7

80.1

Minor 5ss

44.8

-0.6

2.7

59.5

45.1

Minor BPS

52.8

0.08

1.6

64.5

35.5

Associated Gene:

Gene:

ARHGEF3

Ensembl Gene ID:

ENSAPLG00000003091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019189

193081 - 317844

124764

ENSAPLT00000018679

308045 - 317293

9249

ENSAPLT00000046834

193615 - 317293

123679

ENSAPLT00000003173

288136 - 317529

29394

ENSAPLT00000042761

201438 - 317844

116407

ENSAPLT00000040149

249639 - 317529

67891