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Intron Name: Anas_platyrhynchos_platyrhynchos_13_311270_311629_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

311270 - 311629

Intron Length:

360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTTTATCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CATATATTAATT

Flanking Amino Acid:

LIEDLKLAKKAYHDPMLKLS

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.2

72.6

39.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

91.3

0.93

0.7

89.8

25.3

Minor 5ss

57.9

0.27

2.4

73.9

42.6

Minor BPS

56.1

0.27

1.6

70.65

40.3

Associated Gene:

Gene:

ARHGEF3

Ensembl Gene ID:

ENSAPLG00000003091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018679

308045 - 317293

9249

ENSAPLT00000046834

193615 - 317293

123679

ENSAPLT00000003173

288136 - 317529

29394

ENSAPLT00000042761

201438 - 317844

116407

ENSAPLT00000040149

249639 - 317529

67891

ENSAPLT00000019189

193081 - 317844

124764