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Intron Name: Anas_platyrhynchos_platyrhynchos_13_315982_316946_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

315982 - 316946

Intron Length:

965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTACAAAAA

5'SS Class:

major

3'SS Sequence:

TTGTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TTTGCTATATAT

Flanking Amino Acid:

IRGAFSNNERIRNFFRVSFK

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.1

64.2

35.6

Major BPS

71.4

0.53

67.3

39.3

Major PPT

90.3

0.91

0.7

88.9

28.1

Minor 5ss

32.8

-2

3.2

39.3

40.6

Minor BPS

48.1

-0

73.89

42.9

Associated Gene:

Gene:

ARHGEF3

Ensembl Gene ID:

ENSAPLG00000003091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019189

193081 - 317844

124764

ENSAPLT00000018679

308045 - 317293

9249

ENSAPLT00000046834

193615 - 317293

123679

ENSAPLT00000003173

288136 - 317529

29394

ENSAPLT00000042761

201438 - 317844

116407

ENSAPLT00000040149

249639 - 317529

67891