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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3295739_3298704_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
3295739 - 3298704

Intron Length:
2966

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTAAACTCA

5'SS Class:
major

3'SS Sequence:
TCTGGTTCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTAAA

U12 Branch Point Sequence:
TTTAAACTAATT

Flanking Amino Acid:
HSNEDGTRCIDVDECQTGVH

Intron Amino Acid Position:
932

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.9
0.49
1.1
62.3
39

Major BPS
81.6
0.78
0.8
82
24.9

Major PPT
79.3
0.66
0.9
73
37.4

Minor 5ss
44
-0.7
2.9
57.1
47.1

Minor BPS
48.5
-0
2.1
76.25
39.7

Associated Gene:

Gene:
FBLN2

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3282430 - 3415698
133269

3282430 - 3389444
107015