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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3301294_3307128_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
3301294 - 3307128

Intron Length:
5835

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGATGA

5'SS Class:
strong_major

3'SS Sequence:
CTGTTTCTTGTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCATAAA

U12 Branch Point Sequence:
AATTGTTTAACT

Flanking Amino Acid:
FILNRHRKCVDINECVTDTH

Intron Amino Acid Position:
793

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.8
0.77
0.9
70.5
36.3

Major BPS
66
0.4
1.1
66.5
36.3

Major PPT
81.5
0.71
0.8
77.3
31.5

Minor 5ss
37.4
-1.4
3
44.6
45.1

Minor BPS
69.3
0.68
1.7
83.43
37.5

Associated Gene:

Gene:
FBLN2

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3282430 - 3389444
107015