Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_3312447_3313951_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3312447 - 3313951

Intron Length:

1505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTTAGTGTC

5'SS Class:

major

3'SS Sequence:

TGTTCTCTGTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGAGAA

U12 Branch Point Sequence:

TGTTAGAGAACC

Flanking Amino Acid:

EPLPTVTPEKVSETEDHNEA

Intron Amino Acid Position:

604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.2

71.7

38.6

Major BPS

48.8

-0

1.1

44.7

38.7

Major PPT

73.6

0.53

36.7

Minor 5ss

33.2

-1.9

3.1

37.3

40.2

Minor BPS

43.1

-0.5

2.4

62.55

Associated Gene:

Gene:

FBLN2

Ensembl Gene ID:

ENSAPLG00000014027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022220

3282430 - 3415698

133269

ENSAPLT00000014659

3282430 - 3389444

107015