Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_344431_345636_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

344431 - 345636

Intron Length:

1206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTACCCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

CTCCCCCTACCC

Flanking Amino Acid:

EASENSCQYEGGRTSDSPHS

Intron Amino Acid Position:

762

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

56.4

0.15

55.3

26.8

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

47.9

-0.1

60.5

44.7

Associated Gene:

Gene:

TASOR

Ensembl Gene ID:

ENSAPLG00000003328

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041173

327061 - 357167

30107

ENSAPLT00000023834

327061 - 362404

35344

ENSAPLT00000003441

327061 - 357167

30107