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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3458325_3460772_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3458325 - 3460772

Intron Length:

2448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTATA

5'SS Class:

major

3'SS Sequence:

TGTAAACATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTTTCTGTAACT

Flanking Amino Acid:

PLGGLAISPQGIVKRDEVVF

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

80.9

32.8

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

64.3

0.32

1.1

56.2

43.5

Minor 5ss

41.8

-0.9

2.5

51.7

44.8

Minor BPS

74.9

0.86

1.9

95.57

31.2

Associated Gene:

Gene:

HDAC11

Ensembl Gene ID:

ENSAPLG00000012032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012533

3457082 - 3483655

26574