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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3460952_3463839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3460952 - 3463839

Intron Length:

2888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GAAACTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

TGCTCAGTAACA

Flanking Amino Acid:

YIYPGDGFAKRAIKRKVELE

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.2

87.1

Major BPS

0.3

34.1

Major PPT

66.5

0.37

62.6

43.6

Minor 5ss

40.7

-1

2.8

50.6

39.2

Minor BPS

51.5

0.04

2.3

69.26

42.8

Associated Gene:

Gene:

HDAC11

Ensembl Gene ID:

ENSAPLG00000012032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012533

3457082 - 3483655

26574