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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3463937_3466133_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3463937 - 3466133

Intron Length:

2197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

GGATTTCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

TAACTCTGGATT

Flanking Amino Acid:

ATIIDLDAHQGNGHERDFMD

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

0.45

0.9

67.6

25.3

Major PPT

70.3

0.46

0.9

67.1

40.2

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

51.1

0.11

1.4

66.54

37.8

Associated Gene:

Gene:

HDAC11

Ensembl Gene ID:

ENSAPLG00000012032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012533

3457082 - 3483655

26574