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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3466197_3467904_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3466197 - 3467904

Intron Length:

1708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCGCATATCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ATCTCTTCATCT

Flanking Amino Acid:

AYADITLAIKFLFERVPGVS

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

67.8

0.4

58.3

41.3

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

55.5

0.25

1.8

74.31

42.8

Associated Gene:

Gene:

HDAC11

Ensembl Gene ID:

ENSAPLG00000012032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012533

3457082 - 3483655

26574