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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3469569_3474656_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3469569 - 3474656

Intron Length:

5088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TAATTTTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

CTTACTGTAATT

Flanking Amino Acid:

LRTQTGGTIMAGKLAVDRGW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.2

39.9

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

72.2

0.5

1.1

76.4

37.4

Minor 5ss

38.6

-1.3

3.4

52.7

46.4

Minor BPS

55.1

0.24

2.1

75.87

41.7

Associated Gene:

Gene:

HDAC11

Ensembl Gene ID:

ENSAPLG00000012032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012533

3457082 - 3483655

26574