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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3507089_3507909_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3507089 - 3507909

Intron Length:

821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ACGTCTCTTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CTCTTTTTAACG

Flanking Amino Acid:

LTSIIFAEDITTGQVLRCDA

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

87.3

0.93

0.8

36.5

Major PPT

63.9

0.31

1.1

60.6

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

68.2

0.43

1.4

65.89

42.8

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230