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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3523502_3524723_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3523502 - 3524723

Intron Length:

1222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTACTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAA

U12 Branch Point Sequence:

TGTCACTTAAAA

Flanking Amino Acid:

DAALTSVVDQDGGVHTFPVP

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

83.5

35.1

Major BPS

0.47

69.9

32.6

Major PPT

84.4

0.77

0.7

30.7

Minor 5ss

46.2

-0.4

2.8

67.2

43.9

Minor BPS

62.6

0.39

1.6

72.76

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230