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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3531865_3533140_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3531865 - 3533140

Intron Length:

1276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATTTAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGTTTTTAATT

Flanking Amino Acid:

ENRGVFVPLQGRLKPTADFC

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.2

26.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.5

0.51

69.3

41.3

Minor 5ss

34.1

-1.8

2.8

40.5

45.7

Minor BPS

73.6

0.82

1.1

81.25

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230