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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3533287_3535912_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3533287 - 3535912

Intron Length:

2626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCATTCATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TAATCCCTAACT

Flanking Amino Acid:

ITIAAYLPLKTVDPPSVALV

Intron Amino Acid Position:

647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

0.65

0.9

70.4

39.8

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

73.4

0.81

1.6

87.56

36.9

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230