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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3538023_3539255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3538023 - 3539255

Intron Length:

1233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CATTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTCAGTTCAAAA

Flanking Amino Acid:

CPLLQQNKQVVPVSNYRNPV

Intron Amino Acid Position:

779

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

66.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

86.7

0.83

0.7

84.4

Minor 5ss

34.5

-1.8

3.4

44.4

Minor BPS

44.9

-0.3

57.3

42.1

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230