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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3539842_3542049_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3539842 - 3542049

Intron Length:

2208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACTCAGA

5'SS Class:

major

3'SS Sequence:

TTGTTTCTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAA

U12 Branch Point Sequence:

TTTGCTGTCACA

Flanking Amino Acid:

HLKAAKVKIPYEPLLPVSAA

Intron Amino Acid Position:

879

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.3

0.24

1.2

53.2

45.4

Major BPS

60.1

0.25

1.3

61.7

43.1

Major PPT

86.1

0.81

0.7

85.5

29.2

Minor 5ss

38.2

-1.3

3.1

48.8

47.2

Minor BPS

47.9

-0.1

2.4

70.26

42.8

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230