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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3546506_3547133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3546506 - 3547133

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TTATTAATTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GTGTTATTAATT

Flanking Amino Acid:

VTLIIGAMIQITSEGGPQPQ

Intron Amino Acid Position:

1100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.6

37.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

76.5

0.6

0.9

38.6

Minor 5ss

32.4

-2

3.4

46.7

48.6

Minor BPS

64.2

0.52

1.6

77.41

39.2

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230