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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3547314_3548737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3547314 - 3548737

Intron Length:

1424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGTAT

5'SS Class:

major

3'SS Sequence:

TCTTCATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

AATGCCTGACCT

Flanking Amino Acid:

ETGKVVVVSQDKVEVEVVQL

Intron Amino Acid Position:

1160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

73.6

32.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

83.2

0.75

0.7

81.6

29.1

Minor 5ss

-1.9

3.3

46.5

48.8

Minor BPS

53.3

0.18

1.9

72.62

43.8

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230