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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3548819_3549774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3548819 - 3549774

Intron Length:

956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGAAT

U12 Branch Point Sequence:

CTTGAATTACCT

Flanking Amino Acid:

PITRMKTGTQMPVYVMGITS

Intron Amino Acid Position:

1187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

38.1

Major BPS

62.3

0.31

1.4

73.3

39.1

Major PPT

83.9

0.76

0.7

76.9

31.7

Minor 5ss

-1.7

2.7

41.8

44.6

Minor BPS

46.9

-0.1

2.1

69.75

46.7

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230