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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3549907_3550106_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3549907 - 3550106

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACATGT

5'SS Class:

major

3'SS Sequence:

TCTTCTGTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

AAAACTTTGATT

Flanking Amino Acid:

TLDIKTRHNEASFQLPAKYN

Intron Amino Acid Position:

1231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

72.5

39.9

Major BPS

0.85

0.9

39.9

Major PPT

72.8

0.51

1.1

71.1

38.8

Minor 5ss

45.2

-0.5

65.7

45.3

Minor BPS

58.6

0.35

1.2

67.42

37.2

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230