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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3556529_3557905_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3556529 - 3557905

Intron Length:

1377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTTTTTATTT

Flanking Amino Acid:

HNSVLSFATNRDDFVQIGKG

Intron Amino Acid Position:

1431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

85.3

32.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.4

0.98

0.7

89.1

26.3

Minor 5ss

38.9

-1.2

3.1

53.5

43.9

Minor BPS

59.2

0.37

1.5

72.97

39.1

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230