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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3558768_3559344_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3558768 - 3559344

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

ATCCTTTATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TCATCCTTTATT

Flanking Amino Acid:

IPGLLKTYREIIVNIPQRTT

Intron Amino Acid Position:

1550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.1

37.5

Major BPS

78.6

0.71

79.6

32.9

Major PPT

79.1

0.65

0.9

77.4

35.3

Minor 5ss

25.6

-2.8

3.1

31.9

42.9

Minor BPS

69.3

0.69

1.6

80.61

41.3

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230