Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_355917_356293_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

355917 - 356293

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATAT

5'SS Class:

strong_major

3'SS Sequence:

TGTATAACTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TACTGTATAACT

Flanking Amino Acid:

PPSDVQKRQSDAVLTLTPLE

Intron Amino Acid Position:

1516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

79.6

29.2

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

68.5

0.42

64.7

41.4

Minor 5ss

39.7

-1.2

3.1

56.3

47.9

Minor BPS

52.2

0.15

73.7

43.2

Associated Gene:

Gene:

TASOR

Ensembl Gene ID:

ENSAPLG00000003328

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003441

327061 - 357167

30107

ENSAPLT00000041173

327061 - 357167

30107