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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3559469_3560264_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3559469 - 3560264

Intron Length:

796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTCCTTCCCC

Flanking Amino Acid:

LIGEGNKNLKGGCLPAQIEA

Intron Amino Acid Position:

1591

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.4

36.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

79.2

0.66

0.7

Minor 5ss

43.4

-0.7

2.8

56.4

47.7

Minor BPS

48.6

-0.1

3.6

82.21

38.6

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230