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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3560412_3562440_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3560412 - 3562440

Intron Length:

2029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCAAAAT

U12 Branch Point Sequence:

CAACAGTTAACA

Flanking Amino Acid:

IAEPGFDAVSGHYTCSITMH

Intron Amino Acid Position:

1640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.7

86.9

22.8

Major BPS

0.2

1.2

63.9

38.5

Major PPT

88.3

0.86

0.7

84.9

29.9

Minor 5ss

41.5

-0.9

3.1

48.2

Minor BPS

46.2

-0.2

2.2

56.16

42.2

Associated Gene:

Gene:

NUP210

Ensembl Gene ID:

ENSAPLG00000012355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012937

3498985 - 3566214

67230