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Intron Name: Anas_platyrhynchos_platyrhynchos_13_358673_359318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

358673 - 359318

Intron Length:

646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATGTA

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAACAT

U12 Branch Point Sequence:

TTTGGAGTAAAA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

35.2

Major BPS

54.4

0.11

61.4

34.3

Major PPT

95.5

1.02

0.5

88.9

28.1

Minor 5ss

34.5

-1.8

3.5

49.1

47.1

Minor BPS

41.1

-0.6

2.6

61.42

44.5

Associated Gene:

Gene:

CCDC66

Ensembl Gene ID:

ENSAPLG00000003610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003718

358602 - 382202

23601