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Intron Name: Anas_platyrhynchos_platyrhynchos_13_359406_363379_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

359406 - 363379

Intron Length:

3974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ACATTTATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTATATTACAT

Flanking Amino Acid:

ILKGLSELRQGLLQKQKELE

Intron Amino Acid Position:

896

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

77.6

0.62

0.9

74.4

39.3

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

49.2

0.02

74.94

41.4

Associated Gene:

Gene:

CCDC66

Ensembl Gene ID:

ENSAPLG00000003610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048372

359319 - 409930

50612

ENSAPLT00000003718

358602 - 382202

23601