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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3627360_3695523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3627360 - 3695523

Intron Length:

68164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCGCT

5'SS Class:

major

3'SS Sequence:

TGTTACTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

TGTTACTTTACA

Flanking Amino Acid:

SAIQENAKHEKSEGESSRSI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

72.5

37.3

Major BPS

0.57

1.2

41.2

Major PPT

83.3

0.75

0.9

76.6

37.3

Minor 5ss

40.7

-1

3.4

57.2

41.4

Minor BPS

65.1

0.47

1.8

77.7

38.3

Associated Gene:

Gene:

IQSEC1

Ensembl Gene ID:

ENSAPLG00000013323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019377

3627094 - 3966361

339268

ENSAPLT00000018841

3627094 - 3966361

339268

ENSAPLT00000039597

3627020 - 3966361

339342