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Intron Name: Anas_platyrhynchos_platyrhynchos_13_364558_365742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

364558 - 365742

Intron Length:

1185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTACA

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTTACT

Flanking Amino Acid:

MKNKRHRIRKEEQLHKNNLN

Intron Amino Acid Position:

746

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.7

33.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.9

0.54

0.9

66.1

40.8

Minor 5ss

41.6

-0.9

2.5

52.6

Minor BPS

67.8

0.64

1.8

89.13

35.2

Associated Gene:

Gene:

CCDC66

Ensembl Gene ID:

ENSAPLG00000003610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003718

358602 - 382202

23601

ENSAPLT00000048372

359319 - 409930

50612

ENSAPLT00000037726

341599 - 382202

40604