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Intron Name: Anas_platyrhynchos_platyrhynchos_13_366207_367560_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

366207 - 367560

Intron Length:

1354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACACAGC

5'SS Class:

major

3'SS Sequence:

CATTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TATACTTGAAGT

Flanking Amino Acid:

TSRKDTAVQTDDCNTSACID

Intron Amino Acid Position:

591

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

60.6

44.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

85.7

0.8

0.7

84.9

29.6

Minor 5ss

-1.4

3.2

52.2

44.6

Minor BPS

55.8

0.26

1.8

74.91

41.5

Associated Gene:

Gene:

CCDC66

Ensembl Gene ID:

ENSAPLG00000003610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048372

359319 - 409930

50612

ENSAPLT00000037726

341599 - 382202

40604

ENSAPLT00000003718

358602 - 382202

23601