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Intron Name: Anas_platyrhynchos_platyrhynchos_13_367681_368158_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

367681 - 368158

Intron Length:

478

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TGATTCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

GCTACATTAAAA

Flanking Amino Acid:

DISKLKKNLGGDTELENCNT

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

86.6

Major BPS

70.2

0.5

71.6

30.1

Major PPT

79.6

0.67

0.8

77.8

36.3

Minor 5ss

26.8

-2.7

3.6

35.1

34.5

Minor BPS

53.8

0.12

1.8

63.88

41.6

Associated Gene:

Gene:

CCDC66

Ensembl Gene ID:

ENSAPLG00000003610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037726

341599 - 382202

40604

ENSAPLT00000003718

358602 - 382202

23601

ENSAPLT00000048372

359319 - 409930

50612