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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3695554_3786408_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3695554 - 3786408

Intron Length:

90855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTGTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

GGTGTTTTGACT

Flanking Amino Acid:

KSEGESSRSIRSLNTLHQFC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.6

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

69.7

0.44

0.9

64.5

36.5

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

59.4

0.38

1.4

71.63

39.7

Associated Gene:

Gene:

IQSEC1

Ensembl Gene ID:

ENSAPLG00000013323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031035

3628053 - 3966023

337971

ENSAPLT00000019377

3627094 - 3966361

339268

ENSAPLT00000018841

3627094 - 3966361

339268

ENSAPLT00000039597

3627020 - 3966361

339342