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Intron Name: Anas_platyrhynchos_platyrhynchos_13_371167_371540_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

371167 - 371540

Intron Length:

374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTATGATTAAAA

Flanking Amino Acid:

SSALDHSQKVSFLRSMTALL

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

84.6

0.86

41.2

Major PPT

84.4

0.77

0.8

80.5

31.5

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

53.1

0.09

2.1

71.09

40.4

Associated Gene:

Gene:

CCDC66

Ensembl Gene ID:

ENSAPLG00000003610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037726

341599 - 382202

40604

ENSAPLT00000003718

358602 - 382202

23601

ENSAPLT00000048372

359319 - 409930

50612