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Intron Name: Anas_platyrhynchos_platyrhynchos_13_376372_377358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

376372 - 377358

Intron Length:

987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGTGC

5'SS Class:

major

3'SS Sequence:

TATTCTACTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTACATTAAAA

Flanking Amino Acid:

ETHNEKQEETAESSEENTSF

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

64.8

42.3

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

80.8

0.69

0.8

74.9

34.3

Minor 5ss

36.6

-1.5

3.3

41.6

45.3

Minor BPS

0.5

1.7

79.31

35.9

Associated Gene:

Gene:

CCDC66

Ensembl Gene ID:

ENSAPLG00000003610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048372

359319 - 409930

50612

ENSAPLT00000037726

341599 - 382202

40604

ENSAPLT00000003718

358602 - 382202

23601