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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3786496_3811198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3786496 - 3811198

Intron Length:

24703

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

TTACTGTTATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATTATTTTACT

Flanking Amino Acid:

LAVPATHSEYRNSLETGSSI

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

84.3

26.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

75.1

0.56

74.1

40.1

Minor 5ss

-1.8

3.5

46.9

48.4

Minor BPS

62.5

0.48

1.8

82.04

38.9

Associated Gene:

Gene:

IQSEC1

Ensembl Gene ID:

ENSAPLG00000013323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039597

3627020 - 3966361

339342

ENSAPLT00000032308

3704318 - 3966361

262044

ENSAPLT00000018841

3627094 - 3966361

339268