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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3786496_3916428_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3786496 - 3916428

Intron Length:

129933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

ATTGTCTGTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTCTTTTTATT

Flanking Amino Acid:

LAVPATHSEYSVEGEAPSSE

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

84.3

26.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.5

0.46

62.8

43.6

Minor 5ss

-1.8

3.5

46.9

48.4

Minor BPS

55.6

0.26

1.6

73.31

37.6

Associated Gene:

Gene:

IQSEC1

Ensembl Gene ID:

ENSAPLG00000013323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031035

3628053 - 3966023

337971

ENSAPLT00000019377

3627094 - 3966361

339268