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Intron Name: Anas_platyrhynchos_platyrhynchos_13_378841_380744_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

378841 - 380744

Intron Length:

1904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATTTTTT

5'SS Class:

weak_major

3'SS Sequence:

TGTTTCCCAAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TGTTTCCCAAAA

Flanking Amino Acid:

GKPRLILASYDKSRLSVKMG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

75.1

35.1

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

64.2

0.32

1.1

65.5

35.3

Minor 5ss

58.6

0.29

2.3

72.8

Minor BPS

48.8

-0

1.9

66.59

39.1

Associated Gene:

Gene:

CCDC66

Ensembl Gene ID:

ENSAPLG00000003610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037726

341599 - 382202

40604

ENSAPLT00000003718

358602 - 382202

23601