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Intron Name: Anas_platyrhynchos_platyrhynchos_13_380810_382191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

380810 - 382191

Intron Length:

1382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGAGC

5'SS Class:

major

3'SS Sequence:

TCTCCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCCT

U12 Branch Point Sequence:

CTTTCTTTCTCT

Flanking Amino Acid:

MNLGDGLKLETEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

67.8

43.5

Major BPS

37.5

-0.7

4.3

79.6

35.6

Major PPT

88.4

0.86

0.7

83.7

24.3

Minor 5ss

32.2

-2

3.1

34.8

41.4

Minor BPS

-0.3

3.6

79.06

43.7

Associated Gene:

Gene:

CCDC66

Ensembl Gene ID:

ENSAPLG00000003610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037726

341599 - 382202

40604

ENSAPLT00000003718

358602 - 382202

23601