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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3871477_3916428_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3871477 - 3916428

Intron Length:

44952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTCTA

5'SS Class:

strong_major

3'SS Sequence:

ATTGTCTGTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTCTTTTTATT

Flanking Amino Acid:

TPTALAFAEASVEGEAPSSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

38.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.5

0.46

62.8

43.6

Minor 5ss

36.4

-1.5

3.3

49.3

46.9

Minor BPS

55.6

0.26

1.6

73.31

37.6

Associated Gene:

Gene:

IQSEC1

Ensembl Gene ID:

ENSAPLG00000013323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013887

3871313 - 3966023

94711