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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3944511_3946153_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3944511 - 3946153

Intron Length:

1643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

CTTTCTACTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GTTTAATGAACT

Flanking Amino Acid:

VEKLIVGKKPIGSLHHGLGC

Intron Amino Acid Position:

769

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

81.8

0.79

1.1

34.5

Major PPT

79.1

0.66

0.8

73.9

29.7

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

57.1

0.3

1.9

80.74

39.9

Associated Gene:

Gene:

IQSEC1

Ensembl Gene ID:

ENSAPLG00000013323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032308

3704318 - 3966361

262044

ENSAPLT00000031035

3628053 - 3966023

337971

ENSAPLT00000043342

3899091 - 3966361

67271

ENSAPLT00000019377

3627094 - 3966361

339268

ENSAPLT00000039597

3627020 - 3966361

339342

ENSAPLT00000013887

3871313 - 3966023

94711

ENSAPLT00000035729

3830554 - 3966361

135808