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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3944511_3948541_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3944511 - 3948541

Intron Length:

4031

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TGTATGACAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

TAACCATTAACC

Flanking Amino Acid:

VEKLIVGKKPVLSLPHRRLV

Intron Amino Acid Position:

857

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

62.6

0.28

1.1

55.9

43.4

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

65.1

0.45

1.6

72.05

37.8

Associated Gene:

Gene:

IQSEC1

Ensembl Gene ID:

ENSAPLG00000013323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018841

3627094 - 3966361

339268