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Intron Name: Anas_platyrhynchos_platyrhynchos_13_3989759_3990452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3989759 - 3990452

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

ASAGMIKKLIEMTAEYACTR

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.7

0.76

0.9

85.8

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

ACAD9

Ensembl Gene ID:

ENSAPLG00000013493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014117

3977437 - 3998169

20733

ENSAPLT00000038392

3977437 - 3998169

20733

ENSAPLT00000030577

3976979 - 3998169

21191